Difference between revisions of "Computational Medicine"

Revision as of 01:12, 15 December 2018

There is no consistent definition of //computational medicine// yet. So I will come up with my own general definition for now: Computational medicine is the application of computing methods to model, simulate and visualize medical processes in a virtual environment.

//Computational Medicine// is commonly divided into four areas. For now I take the definition by JHU to clarify what Computational Medicine covers.

Computational Molecular Medicine (pharmacogenomics, metagenomics, ...)
Computational Physiology (disease process models, pharmacokinectic/pharmatcodynamic models, ...)
Computational Anatomy (imaging, implantable devices, ...)
Computational Healthcare (epidemiology, medical apps, ... )

For details look into the following paper: Computational Medicine - Translating Models to Clinical Care

Dynamics of affective disorders (cellular, tissue, organ, psychical, social)
Tissue healing processes after severve trauma (cellular, tissue, organ, organ system)
Multi-scale tumor dynamics (molecular, cellular, tissue, organ)
Computational surgery with focus on neuro and trauma surgery (tissue, organ, organ system, organism)
Modeling techniques for physiological pathophysiological processes
Foundational algorithms of tissue formation

[morpheus.gitlab.io Morpheus - A modeling and simulation environment for the study of multi-scale and multicellular systems]

Parallel Reverse Engineering with Mutual information & Entropy Reduction

OpenDreamkit

Predictive Cancer Pathway Modelling

Tusscher Group, Unviersity of Utrecht

Hermsen Group, University of Utrecht

HHU, AG Computational Cell Biology

BioCAE: A New Strategy of Complex Biological Systems for Biofabrication of Tissues and Organs

Computational Systems Biology - From Molecular Mechanisms to Disease

A computational systems biology software platform for multiscale modeling and simulation integrating whole-body physiology, disease biology, and molecular reaction networks

OpenWorm

PhysioNet - Resource for physiological signals

SpaceSys - Spatio-Temporal Dynamics in Systems Biology

[https://cfaed.tu-dresden.de/biological-systems Center for Advancing Electronics Dresden - Biological Systems]

@@ Line 38: / Line 38: @@
 [http://www.computational.ch/research/default.html Zürich Computational Medicine Research Group ]
+[https://tu-dresden.de/med/mf/imb/forschung/arbeitsgruppen-am-imb/ag-roeder-medizinische-systembiologie-und-biometrie TU Dresden - Medical Systems Biology]
+[https://www.dkfz.de/en/medphys/computational-patient-models/mainpage.html DZKF - Computational Patient Models]
 [http://www.zib.de/numeric/computational-medicine Zuse Institute Berlin ]
 [https://med.nyu.edu/institute-computational-medicine/ NYU Institute for Computational Medicine ]
+[https://www.wias-berlin.de/research/mfs/biomed/index.jsp?lang=0 Weierstrass Institut Berlin - Quantitative Biomedicine]
@@ Line 63: / Line 69: @@
 === Relevant Groups, Projects and Methods ===
-[http://www.scs.illinois.edu/schulten/lm/ Lattice Microbes ]
+[http://www.scs.illinois.edu/schulten/lm/ Lattice Microbes]
 [http://vcell.org/ Virtual Cell]
+[http://www.compucell3d.org/ CompuCell3D - Virtual Tissue in-silico simulation]
+[morpheus.gitlab.io Morpheus - A modeling and simulation environment for the study of multi-scale and multicellular systems]
 [https://sites.google.com/site/premertoolbox/ Parallel Reverse Engineering with Mutual information & Entropy Reduction]
@@ Line 82: / Line 92: @@
 [http://www.sciencedirect.com/science/book/9780124059269  Computational Systems Biology - From Molecular Mechanisms to Disease]
 [https://www.ncbi.nlm.nih.gov/pubmed/21483730 A computational systems biology software platform for multiscale modeling and simulation integrating whole-body physiology, disease biology, and molecular reaction networks]
-[http://www.openworm.org/ | OpenWorm ]]
+[http://www.openworm.org/ OpenWorm ]
+[https://physionet.org/ PhysioNet - Resource for physiological signals]
+[https://tu-dresden.de/zih/forschung/projekte/space_sys SpaceSys - Spatio-Temporal Dynamics in Systems Biology]
+[https://cfaed.tu-dresden.de/biological-systems
+Center for Advancing Electronics Dresden - Biological Systems]

Navigation menu

Difference between revisions of "Computational Medicine"

Revision as of 01:12, 15 December 2018

Contents

Propsed Focus

Journals

Research Groups and Projects

Some interesting papers

Relevant Groups, Projects and Methods